This function demonstrates how to run
the `PRIMEmodel::predictFocal()` pipeline
using example CTSS and region data bundled with the `PRIMEmodel` package.
It loads pre-packaged test data, runs the pipeline, and returns the result.
Usage
predictFocalExample(python_path = NULL, log_dir = NULL, keep_tmp = FALSE, ...)
Arguments
- python_path
Character path to the Python binary
in the desired environment. Default is NULL.
- log_dir
Optional character path to save the log file.
- keep_tmp
Logical. If `TRUE`, temporary files and folders are retained.
Default is `FALSE`.
Value
A `GRanges` object or a `GRangesList` object,
depending on the number of samples in the example dataset.