Decompose tag cluster into subclusters according to CTSS expression fraction of summit CTSS expression. Subclusters within mergeDist bp will be merged.

Decompose tag cluster into subclusters according to CTSS expression fraction of summit CTSS expression. Subclusters within mergeDist bp will be merged.

Usage

summit_decompose(views, fraction = 0.1, mergeDist = 20)

Arguments

views

A Views object of tag clusters.

fraction

The fraction of the summit CTSS expression that a CTSS must have to be considered part of the tag cluster.

mergeDist

The distance within which subclusters will be merged.

Value

An IRanges object of decomposed tag clusters.