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Normalize expression counts by size factors.

Usage

normalizeBySizeFactors(
  object,
  sizeFactors,
  inputAssay = "counts",
  outputAssay = "normalized"
)

Arguments

object

A SummarizedExperiment object.

sizeFactors

The size factors to use for the normalization.

inputAssay

The assay to use.

outputAssay

The assay to use for the output.

Value

A SummarizedExperiment object with the normalized counts.