Decompose tag clusters according to pooled values and a decomposition function (implemented functions: summit_decompose and local_maxima_decompose)

Decompose tag clusters according to pooled values and a decomposition function (implemented functions: summit_decompose and local_maxima_decompose)

Usage

decompose(object, pooled, fn = summit_decompose, ...)

Arguments

object

A GRanges object of tag clusters.

pooled

A RangedSummarizedExperiment object containing the CTSSs.

fn

A function that carries out the actual decomposition. Implemented functions are summit_decompose and local_maxima_decompose. It takes as input a Views object (and optional arguments) and returns an IRanges object

...

Additional arguments passed on to the decomposition function.

Value

A GRanges object of decomposed tag clusters.