Calculate the cumulative fraction of CTSSs around loci.

Calculate the cumulative fraction of CTSSs around loci.

Usage

cumulativeFractionAroundLoci(loci, ctss, max_dist = 1000)

Arguments

loci

A GRanges object of loci to focus on.

ctss

A RangedSummarizedExperiment object containing the CTSSs.

max_dist

The number of base pairs to consider around each locus.

Value

A data frame containing the cumulative fraction of CTSSs around the loci, for each sample.